rather than GC landscapes over the genome
We focused on 3,701 GC events delimited by five hundred bp or less (GC500 sequences). Only motifs with E-value<1?10 ?10 are shown and ranked by E-value. Presence indicates the total number of motifs per 100 GC500 sequences, including the possible multiple presence in a single sequence. For display purposes, sequence motifs are chosen between forward and reverse to maximize the presence of A and/or C nucleotides.
Earlier in the day analyses into the D. pseuddobscura recognized a somewhat positive relationship anywhere between recombination rate and easy repeats, as well as the themes CACAC , CCTCCCT and you will CCCCACCCC . An identical study in the D. persimilis found a positive organization out of rate on the CCNCCNTNNCCNC sequence theme often proves to be associated with the human recombination prices . A more recent data reported new motif GTGGAAA are introduce close situations from inside the D. melanogaster . All of our investigation confirms the significant enrichment of some ones sequences ( CACAC and you can CCTCCCT ) and you may finds brand new ones, since there is zero service to possess CCCCACCCC or GTGGAAA because motifs for the increased recombination inside D.rather than GC landscapes over the genome